A violin plot is a method of plotting numeric data. It is a box plot with a rotated kernel density plot on each side.
A violin plot is a method of plotting numeric data. It is a box plot with a rotated kernel density plot on each side.
Questions tagged [violin-plot]
364 questions
2
votes
1 answer
Adding p-values to a violin plot in seurat
I currently have a seurat object scData in which I have applied module scored by using AddModuleScore.
AddModuleScore(scData, features = inflam, name = "inflam_score", seed = 1, search = FALSE, assay = NULL, nbin = 21, ctrl = 100, pool = NULL)
I've…
mmpp
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2
votes
0 answers
Swap Axes of Violin plot
I am trying to create Violin Plots using the StatsPlots.jl library.
However, I would like to have the returned Violin plot to be horizontal instead of vertical as I want to show the distribution of a variable (e.g. Temperature) for different…
niltsz
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2
votes
1 answer
How can I fix the axes in plotly to see the title?
If I am plot a plotly violin plot, it snipps the title away. How can I fix that?
I have followed code:
len <- c(4.5, 3.0, 4.0, 4.0, 3.0, 3.5, 4.5, 3.0, 3.0, 4.0,
3.0, 4.5, 4.5, 4.0, 3.0,2.0,2.0,1.0,1.5,1.5,
3.5, 4.5,…
JAdel
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2
votes
1 answer
How to adjust error box to violin plot using geom_violin?
***editing:
errbar_lims <- group_by(dt, together) %>%
dplyr::summarize(mean=mean(score), se=sd(score)/sqrt(n()),
upper=mean+(2*se), lower=mean-(2*se))
> dput(dt)
structure(list(ï..count = c(50L, 7L, 21L, 22L, 94L, 58L, 147L,
4L,…
Ortal Gretchin
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2
votes
1 answer
Difficulty plotting a split Violinplot using Seaborn and a Pandas Dataframe
I have dataframe full of likelihoods from a model I am using to identify points of interest on a set of images. The rows correspond to an image and the columns correspond to a label. There are "Left" and "Right" versions of the labels. I would like…
Tetraquark
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2
votes
1 answer
split violinplot with different ranges
I am trying to plot two variables with different ranges using split violinplots in seaborn.
Here's what I have done so far:
from matplotlib import pyplot as plt
import seaborn as sns
import numpy as np
df1 = pd.read_csv('dummy_metric1.csv')
df2 =…
Chica_Programmador
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2
votes
1 answer
Put violin plot on sides and have a line with group average in R ggplot
I have a dataset, of which a subset is:
structure(list(Session = structure(c(2L, 1L, 1L, 2L, 2L, 2L,
1L, 2L, 2L, 2L, 1L, 1L, 1L, 2L, 2L, 1L, 1L, 1L, 2L, 1L, 2L, 2L,
1L, 2L, 2L, 2L, 2L, 1L, 2L, 2L, 2L, 1L, 1L, 2L, 1L, 1L, 1L, 1L,
2L, 2L, 1L, 1L,…
CanyonView
- 401
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2
votes
1 answer
How to determine the x value on the edge of the violinplot for a mean line
I am trying to draw a mean line on violin plots, since I was not able to find a way to make sns replace the "median" line that comes from "quartiles", I decided to code so that for each case it draws on top. I am planning on drawing horizontal lines…
Cindy Burker
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2
votes
2 answers
How to generate separate violinplots for each class and group
I have a pandas dataframe:
df = pd.DataFrame(np.random.randint(0,100,size=(100, 4)), columns=list('ABCD'))
df['Label'] = np.random.randint(0,2,size=100)
I would like to create a figure in python where x-axis shows the class labels ('Class 0' and…
khemedi
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2
votes
0 answers
Making violin plots for a time series in R
I'm trying to make violin plots for my study with repeated measures. Temperature was measured every minute during rest, exercise, and recovery. I want to visualize my data using violin plots every 10 minutes. Connecting the time points with a trace…
VeerleNL
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2
votes
1 answer
python violin plot regular axis
I want to to a violin plot of binned data but at the same time be able to plot a model prediction and visualize how well the model describes the main part of the individual data distributions. My problem here is, I guess, that the x-axis after the…
Fuegon
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2
votes
1 answer
Violin plot with a strange shape
I want to compare the distribution of several dimensions of technologization using violin plots (the dimensions are measured by indices ranging from 1 to 5). 5 out of 6 violin plots look as you would expect, but one has a really odd shape that isn't…
Julius Kötter
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2
votes
1 answer
Violin plot problem in Julia: Cannot use same x-positions for 2 datasets
I use Julia Version 1.4.2 and want to make a violin plot, where I have two datasets A and B, which I want to plot using the same x-ticks. I want that data A is the left half of each x-position and B the right half.
Here a test example:
using…
GeorgKyoto
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2
votes
1 answer
How to make a grouped violinplot from dictionary
I'd like to make a violin plot from a dictionary. Here is an example of what my dictionary looks like, though my actual one has many more patients and many more values.
paired_patients={'Patient_1': {'n':[1, nan, 3, 4], 't': [5,6,7,8]},
…
Emerson
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2
votes
2 answers
Matplotlib / Seaborn violin plots for different data sizes
I have 3 one-dimensional data arrays A, B, C. All of them have different length.
I would like to make a violin plot with 3 violins, one per each array. How do I do this?
EDIT: I have solved the problem by writing a proxy function, but having to…
Aleksejs Fomins
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