Partial Least Squares regression is a statistical method used to find the fundamental relations between two matrices.
Questions tagged [pls]
84 questions
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Moderator variable test using SEMinR, as well as warppls
I'm learning to use various sem-pls software (such as smart-pls, warp-pls, and r), but I'm having trouble building a model using moderator variables, with warp-pls as the reference model.
sem-pls model in warp-pls
In the warppls model, the "kepuasa"…
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Why is a fit failed in PLS example with sklearn in python?
I'm studying the PLS, and I just follow a procedure https://www.statology.org/partial-least-squares-in-python/. In my workplace, there is an error as following:
---------------------------------------------------------------------------
ValueError …
jpxrk
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Scaling dependent variable before PLS?
I have to implement a Partial Least Squares (PLS) where my data features are in the X matrix (N,P) and my dependent variable is Y (Nx1). In PCA as in other Machine Learning methods, one usually needs to standardize the X features before passing the…
user9875321__
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How to extract PLSR coefficients as for glmnet using tidymodels
I tuned a glmnet regression model and extracted the coefficients as described here. That works wonderfully. However, when I use the same form of coefficient extraction for PLSR with mixOmics engine, I obtain single values per term and component as…
borri
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how to weight imbalance class for ordered logistic classification machine learning
I have a question about predicting wine quality (classic wine dataset from UCI). I use ordered logistic classification in PLSR after joining white and red in the same dataset. There are imbalanced numbers between white and red. I have tried SMOTE…
yizhou
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1 answer
PLS (Perl Language Server) on BBEdit Doesn't Seem to Do Anything?
I do most of my development work in BBEdit, which thankfully now supports Language Server Protocol and specifically PLS, a Perl implementation thereof. Near as I can tell, everything is set up properly for PLS to do its magic, but I cannot seem to…
Timothy R. Butler
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how to use R package `caret` to run `pls::plsr( )` with multiple responses
the caret::train() does not seem to accept y if y is a matrix of multiple columns.
Thanks for any help!
blueskyddd
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Compare automatically all possible combinations (1 vs 1) (1 vs 1+2), etc in a function in R
Following my previous question, and with the same example, I would like to modify the groups in the comparison.
Just to remember, I am running a PLS regression by using geomorph.
This function requires two 3D arrays inside it (A1 and A2), as can be…
antecessor
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How to do PLS (Mixomics) with more than 2 blocks of data?
i am doing PLS with Mixomics package. I have 2 blocks of data, Performances and MethodesAlter.
R code :
Y <- Performances
X3 <- MethodesAlter
rownames(X3) <- rownames(Y)
pls1 <- pls(X3, Y, ncomp=4, mode = "canonical")
plotVar(pls1)
But it works…
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Want to get input on same line for variables at different places in Python3. See the below code and text for clarification
I want to take input of how many inputs the user is going to give next and collect those inputs in a single line. For eg. if user enters '3' next he has to give 3 inputs like '4' '5' '6' on the same line.
N = int(input())
result = 0
randomlist =…
Dharshan
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How to use ropls package to split into 80%-20% training and test sets?
I'm trying to use for the first time the ropls package to perform PLS-DA and OPLS-DA predictive models, and as I saw on its documentation, the algorithm provides the option subset="odd", which splits the data into two equal sizes, so 50%-50%. The…
GreenT_
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4 answers
How to change image size with slider?
I have this bit of code and I was wondering if it is possible to change the size of the image just by moving the slider:
The spAce Company
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For block.pls, how do you make the list needed for X
For block.pls, how do you make the list needed for X. If I have to use gene expression data and metabolomics data versus type of cancer how would I set this up? Using data that is called typesofcancerdata
lacie
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1 answer
Recursive Feature Elimination Error - "Error in { : task 1 failed - "wrong sign in 'by' argument"
Thank you so much for your help ahead of time. I'm currently working with a data set that has 794 observations and 1023 variables. I'm attempting to do some sort of feature selection on the data. My initial thought was to do random forest rfe, but…
Lcsballer1
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