Questions tagged [pedigree]
4 questions
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How to format a downloadable file in angular?
I'm trying to create a .ped file with my Angular project, I need a proper (table like) format for the data that I'm getting from the api. I actually need to create a table from that data, download that in a .ped file, and create a pedigree from…
Faraz Khan
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SEQUOIA (R) - error when running parentage assignment step sequoia()
When running the following duplicate check & parentage assignment within the sequoia package:
ParOUT <- sequoia(GenoM = Geno, LifeHistData = LH, Err=0.005, Module="ped",
UseAge = "no",
quiet = FALSE, Plot =…
CRK
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How to add text on the branch of a pedigree tree in R? Or what other software?
I am trying to obtain a pedigree tree to visualise the relationships between Wolf individuals. I tried with the pedigree function of the kinship2 package.
Here is my data and what I obtained from it:
> fakefam
sexID packOrigin Mother Father sex…
Inès Moreno
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2 answers
Convert a dataframe into a ped object in R (pedtools)
I have this dataframe in R. It has the structure of a pedigree dataframe, with the id, fid, mid and sex columns.
pedigree <- structure(list(id = c(212, 214, 263, 266, 273, 274, 275, 279,
280, 281, 286, 287, 312, 313, 314, 315, 316, 317, 318, 319,…
antecessor
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