I'm interested to know if, by any chance, having a Sugar CRM installation inside a folder which is located in the same folder as Joomla! installation could/will cause future problems.
Folder structure:
C:\JoomlaFolder <- Joomla! installation folder
\administrator
\cache
\cli
\components
\...many other folders and sub-folders specific to Joomla!
\SugarCRMFolder <- here's where my Sugar CRM installation is located!
\..many folders and sub-folders specific to Sugar CRM