I have download PLINK from https://www.cog-genomics.org/plink/,
I have download a genetic map from https://www.internationalgenome.org/data-portal/search?q=genetic%2Bmap ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/pilot_data/technical/reference/genetic_map_b36.tar.gz
I am using raw data from Family Tree DNA. Here is a sample of this data in a csv file:
Sample 1:
RSID,CHROMOSOME,POSITION,RESULT
2010-08-Y-1221,0,0,--
rs10039134,0,0,TT
Sample 2:
RSID,CHROMOSOME,POSITION,RESULT
2010-08-Y-1221,0,0,--
rs10039134,0,0,TC
How do I calculate the cM distance between these two samples?
