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I am trying to build TS-1 model with MFI framework from IZA Database. However when I try to open .cif file downloaded form mentioned database all atoms appear in the origin point of a coordinate system. That problem does not occur on MacOS, only on my Linux Mint machine.

I tried to paste coordinates from .cif to Coordinate Editor but of course it did not work, due to coordinates being written as fractional ones.

Edit: I use Avogadro 1.95.1 with Open Babel.

Tomasz Dymkowski
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  • Avogadro runs on Linux. Sounds like you are converting coordinates to integer in Open Babel and doing rounding. Since you provide no details it's impossible to tell. – stark Mar 23 '23 at 16:42

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