I'm having many issues installing tabulizer in R 4.4 on my Mac OS13. I've reproduced the error message below. I've tried every other suggestion on stack and nothing seems to do the trick. I've verified the rJava is installed. Thanks for any help!
remotes::install_github(c("ropensci/tabulizerjars", "ropensci/tabulizer")) Downloading GitHub repo ropensci/tabulizerjars@HEAD ── R CMD build ──────────────────────────────────────────── ✔ checking for file ‘/private/var/folders/wn/fx85qp5d0g9fmz3x3fff93mh0000gn/T/Rtmp5AWuHG/remotes538f6671afb/ropensci-tabulizerjars-d1924e0/DESCRIPTION’ ... ─ preparing ‘tabulizerjars’: ✔ checking DESCRIPTION meta-information ... ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories ─ building ‘tabulizerjars_1.0.1.tar.gz’
installing source package ‘tabulizerjars’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for ‘tabulizerjars’: .onLoad failed in loadNamespace() for 'tabulizerjars', details: call: NULL error: .onLoad failed in loadNamespace() for 'rJava', details: call: dyn.load(jvm, FALSE) error: unable to load shared object '/Library/Java/JavaVirtualMachines/jdk-19.0.2.jdk/Contents/Home/lib/server/libjvm.dylib': dlopen(/Library/Java/JavaVirtualMachines/jdk-19.0.2.jdk/Contents/Home/lib/server/libjvm.dylib, 0x000A): tried: '/Library/Java/JavaVirtualMachines/jdk-19.0.2.jdk/Contents/Home/lib/server/libjvm.dylib' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64e')) Error: loading failed Execution halted ERROR: loading failed
removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/tabulizerjars’ Downloading GitHub repo ropensci/tabulizer@HEAD Downloading GitHub repo ropensci/tabulizerjars@HEAD ── R CMD build ──────────────────────────────────────────── ✔ checking for file ‘/private/var/folders/wn/fx85qp5d0g9fmz3x3fff93mh0000gn/T/Rtmp5AWuHG/remotes538f5c53530/ropensci-tabulizerjars-d1924e0/DESCRIPTION’ ... ─ preparing ‘tabulizerjars’: ✔ checking DESCRIPTION meta-information ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories ─ building ‘tabulizerjars_1.0.1.tar.gz’
installing source package ‘tabulizerjars’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for ‘tabulizerjars’: .onLoad failed in loadNamespace() for 'tabulizerjars', details: call: NULL error: .onLoad failed in loadNamespace() for 'rJava', details: call: dyn.load(jvm, FALSE) error: unable to load shared object '/Library/Java/JavaVirtualMachines/jdk-19.0.2.jdk/Contents/Home/lib/server/libjvm.dylib': dlopen(/Library/Java/JavaVirtualMachines/jdk-19.0.2.jdk/Contents/Home/lib/server/libjvm.dylib, 0x000A): tried: '/Library/Java/JavaVirtualMachines/jdk-19.0.2.jdk/Contents/Home/lib/server/libjvm.dylib' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64e')) Error: loading failed Execution halted ERROR: loading failed
removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/tabulizerjars’ Downloading GitHub repo ropensci/tabulizerjars@HEAD Skipping tabulizerjars, it is already being installed ── R CMD build ──────────────────────────────────────────── ✔ checking for file ‘/private/var/folders/wn/fx85qp5d0g9fmz3x3fff93mh0000gn/T/Rtmp5AWuHG/remotes538f64daab72/ropensci-tabulizer-08e3d76/DESCRIPTION’ ... ─ preparing ‘tabulizer’: ✔ checking DESCRIPTION meta-information ... ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories Removed empty directory ‘tabulizer/docs’ ─ building ‘tabulizer_0.2.3.tar.gz’
ERROR: dependency ‘tabulizerjars’ is not available for package ‘tabulizer’
- removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/tabulizer’ Warning messages: 1: In i.p(...) : installation of package ‘/var/folders/wn/fx85qp5d0g9fmz3x3fff93mh0000gn/T//Rtmp5AWuHG/file538f5b1c5805/tabulizerjars_1.0.1.tar.gz’ had non-zero exit status 2: In i.p(...) : installation of package ‘/var/folders/wn/fx85qp5d0g9fmz3x3fff93mh0000gn/T//Rtmp5AWuHG/file538f5626e545/tabulizerjars_1.0.1.tar.gz’ had non-zero exit status 3: In i.p(...) : installation of package ‘/var/folders/wn/fx85qp5d0g9fmz3x3fff93mh0000gn/T//Rtmp5AWuHG/file538f3cd1f86a/tabulizer_0.2.3.tar.gz’ had non-zero exit status
