I have differential expression data from both microarray and RNA-seq experiments, and I would like to visualize the data using a circos plot in Python. Can anyone provide me with guidance on how to achieve this?
Specifically, I would like to know:
- How can I format the differential expression data so that it can be used in the circos plot?
- Are there any tutorials or examples available online that I can refer to for guidance?
Thank you in advance for your help!
I have been working with the Python pycircos package to create a circos plot for differential expression data obtained from microarray and RNA-seq experiments. I was able to successfully create the plot using the sample data provided on Github, but I am now facing issues with formatting my own differential expression data. I am unsure about the format that is required for the differential expression data to be used in the pycircos package. Can someone guide me on how to format differential expression data for use in circos plot using the pycircos package? Is there a specific format that I need to use, or can I convert my data to a specific format that is compatible with the package?
