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I want to do a repeated measures MANCOVA in python but have been struggling to find resources/code online. Does anyone have examples of code/packages recommendations for this type of analysis on python?

Thank you!

I have tried the package statsmodels for ANOVA, but cannot find code for MANCOVA.

  • Actually, MANOVA in statsmodels is implemented through the multivariate linear model and takes categorical as well as continuous explanatory variables (similar to OLS plus anova_lm for univariate) https://www.statsmodels.org/dev/generated/statsmodels.multivariate.manova.MANOVA.html – Josef Mar 11 '23 at 21:33
  • e.g. for one-way https://github.com/marsja/jupyter/blob/master/MANOVA_Test_in_Python_Statsmodels_Example.ipynb or multi-way manova with interaction and Helmert (orthogonal) coding https://github.com/statsmodels/statsmodels/issues/8713 – Josef Mar 11 '23 at 21:40

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