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My dataset consists of many patients who went through a treatment and I want to understand if there is a difference between before and after taking it. By far it appears clearly as a Paired Samples t-test, the problem is that I have different historical observations on each patient and let's say I have:

  • patient A with 150 observations before and 350 observations after,
  • patient B with 50 observations before and 300 observations after...

Which test should I use? The one for paired samples (even though n_before ≠ n_after)? A most general Welch's t-test (they are heteroschedastic)?

Is there anything I am missing or doing wrong?

In case of paired samples should I need to use undersampling in order to make the lenghts match?

Thanks to everyone

Angela
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