I was trying to install scikit-bio using pipenv install scikit-bio but I was facing some Cython issues, pasted the logs below. Can you please help me on how to resolve it.
I was using python 3.7 version in a docker container and using pip file and piplock files
Error compiling Cython file:
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...
else:
matrix = self._convert_dict2d_to_matrix(substitution_matrix)
# Set up our mask_length
# Mask is recommended to be max(query_sequence/2, 15)
if mask_auto:
self.mask_length = len(query_sequence) / 2
^
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skbio/alignment/_ssw_wrapper.pyx:584:51: Cannot assign type 'double' to 'int32_t'
