I'd like to create a pdf document with the actual output
of my dashboard and some additional elements:
titlePanel(title="My Map Dashboard")
inputId = "Dates selection"
output$myplot
output$map
I'll think in making something like downloadButton("report", "Generate report")
and set up parameters (params
) to pass to Rmd document take my target elements for the pdf report creation, but not work yet and the output error is:
Listening on http://127.0.0.1:4368
Warning: Error in $.shinyoutput: Reading from shinyoutput object is not allowed.
[No stack trace available]
In my example:
library(leaflet)
library(leaflet.providers)
library(ggplot2)
library(shinythemes)
library(sf)
library(lubridate)
library(dplyr)
library(rmarkdown)
library(rgdal)
# get AOI
download.file(
"https://github.com/Leprechault/trash/raw/main/stands_example.zip",
zip_path <- tempfile(fileext = ".zip")
)
unzip(zip_path, exdir = tempdir())
# Open the files
setwd(tempdir())
stands_extent <- readOGR(".", "stands_target") # Border
stands_ds <- read.csv("pred_target_stands.csv", sep=";") # Data set
stands_ds <- stands_ds %>%
mutate(DATA_S2 = ymd(DATA_S2))
# Create the shiny dash
ui <- fluidPage(
theme = shinytheme("cosmo"),
titlePanel(title="My Map Dashboard"),
sidebarLayout(
sidebarPanel(
selectInput(inputId = "selectedvariable0",
label = "Type",
choices = c(unique(stands_ds$PEST)),selected = TRUE ),
selectInput(inputId = "selectedvariable1",
label = "Date",
choices = c(unique(stands_ds$DATA_S)),selected = TRUE ),
selectInput(inputId = "selectedvariable2",
label = "Project",
choices = c(unique(stands_ds$PROJETO)),selected = TRUE ),
selectInput(inputId = "selectedvariable3",
label = "Stand",
choices = c(unique(stands_ds$CD_TALHAO)),selected = TRUE),
selectInput(inputId = "selectedvariable4",
label = "Unique ID",
choices = c(unique(stands_ds$ID_UNIQUE)),selected = TRUE),
downloadButton("report", "Generate report")
),
mainPanel(
textOutput("idSaida"),
fluidRow(
splitLayout(plotOutput("myplot"))),
dateInput(inputId = "Dates selection", label = "Time"),
leafletOutput("map")
)
)
)
server <- function(input, output){
currentvariable0 <- reactive({input$selectedvariable0})
currentvariable1 <- reactive({input$selectedvariable1})
currentvariable2 <- reactive({input$selectedvariable2})
currentvariable3 <- reactive({input$selectedvariable3})
currentvariable4 <- reactive({input$selectedvariable4})
output$myplot <- renderPlot({
#Subset stand
stands_sel <- subset(stands_extent, stands_extent@data$ID_UNIQUE==currentvariable4())
#Subset for input$var and assign this subset to new object, "fbar"
ds_sel<- stands_ds[stands_ds$ID_UNIQUE==currentvariable4(),]
#Create a map
polys <- st_as_sf(stands_sel)
ggplot() +
geom_sf(data=polys) +
geom_point(data=ds_sel,
aes(x=X, y=Y), color="red") +
xlab("Longitude") + ylab("Latitude") +
coord_sf() +
theme_bw() +
theme(text = element_text(size=10))
})
output$map <- renderLeaflet({
stands_actual<-stands_ds[stands_ds$ID_UNIQUE==currentvariable4(),]
lng <- mean(stands_actual$X)
lat <- mean(stands_actual$Y)
leaflet() %>%
setView(lng = lng, lat = lat, zoom=17) %>%
addProviderTiles(providers$Esri.WorldImagery) %>%
addMarkers(lng=stands_actual$X, lat=stands_actual$Y, popup="Location")
})
output$report <- downloadHandler(
filename = "report.pdf",
content = function(file) {
tempReport <- file.path(tempdir(), "report.Rmd")
file.copy("report.Rmd", tempReport, overwrite = TRUE)
# Set up parameters to pass to Rmd document
params <- list(n = c(title="My Map Dashboard", output$myplot,output$map))
# Knit the document, passing in the `params` list, and eval it in a
# child of the global environment (this isolates the code in the document
rmarkdown::render(tempReport, output_file = file,
params = params,
envir = new.env(parent = globalenv())
)
}
)
}
shinyApp(ui, server)
##
Please, any ideas or another way for my problem?
Thanks in advance!!