How to import nodes with 3D coordinate to gephi?
The node file structured like this:
index x y z
0 0.21 0.34 0.34
1 0.23 0.35 0.25
2 0.25 0.45 0.65
...
There are many nodes(10000+).
Asked
Active
Viewed 299 times
1 Answers
0
Your question is rather vague. However, assuming that your nodes are saved in a CSV format, and I am encouraging you to do so, then for importing one can go from "File>Import Spreadsheet" and locate the path to the CSV.
For the first three rows of your data I can see something like that in the Data Laboratory. Please find detailed instructions here
I would suggest that you add some more info about:
- edges (do they exist?)
- Do
x,y,zcorrespond to any coordinates? It is rather difficult to influence node positions from within Gephi...
Yannis P.
- 2,745
- 1
- 24
- 39
-
Yes, the x, y, z correspond to the coordinates in 3D cartesian coordinates. – Ausrada404 Jul 30 '20 at 15:14
-
Then this is a good way to import your nodes but I don't think that Gephi supports 3d coordinates. At least not the newer versions – Yannis P. Jul 30 '20 at 15:22