The main point of this "same order" is, that the sets should be used in the order they are controlled. So
Equation1(t,i,j).. y[t,i] =E= a[t] * x[t,j];
should be better than
Equation2(i,j,t).. y[t,i] =E= a[t] * x[t,j];
Other than that, it is not so easy to give many general rules. If you have also full control over the controlling indices, often it is beneficial, if the largest set is last, so if t >> i
, than x[i,t]
should be better than x[t,i]
. In general, the GAMS command line parameter profile
(https://www.gams.com/latest/docs/UG_GamsCall.html#GAMSAOprofile) is very useful to check the influence of different formulations of your mode.