How can I color-label the cluster data after GMM is fitted?

Question

I am trying to do some labelling on cluster data following GMMs but haven't found a way to do it.

Let me explain:

I have some x,y data pairs into a X=30000x2 array. In reality the array contains the data from different sources (known) and each source has the same number of data (So source 1 has 500 (x,y), source 2 500 (x,y) and so on and all of them are appended into the X array above).

I have fitted a GMM on X. Cluster results are fine and as expected but now that the data are clustered I want to be able to color code them based on their initial origin.

So let's say I want to shown in black the data points of source 1 that are in cluster 2.

Is that possible?

Example: In the original array we have three sources for the data. Source 1 is data from 1-10000, source 2 10001-20000 and source 3 20001-30000.

After GMM fitting and clustering I have clustered my data as per figure 1 and I got two clusters. The red colour in all of them is irrelevant.

I want to modify the color of the data points in cluster 2 based on their index and the original array X. E.g., if a data point belongs to cluster 2 (clusteridx=2), then I want to check to which source it belongs and then color it and label it accordingly. So that you can tell from which source are the data points in cluster 2 as shown in the second figure.

Original clusters

Desired labelling

Please provide a [minimal, complete, and verifiable example](https://stackoverflow.com/help/mcve), and some impression how your output should look like. — HansHirse, Mar 15 '19 at 10:43
I have added an example. I hope i explained it better now. Sorry for that — Nik_ol, Mar 15 '19 at 11:12

score 0 · Accepted Answer · answered Mar 15 '19 at 17:31

You could add a "source_id" column and then plot through a loop on that. For example:

% setup fake data
source1 = rand(10,2);
source2 = rand(15,2);
source3 = rand(8,2);
% end setup

% append column with source_id (you could do this in a loop if you have many sources)
source1 = [source1, repmat(1, length(source1), 1)];
source2 = [source2, repmat(2, length(source2), 1)];
source3 = [source3, repmat(3, length(source3), 1)];

mytable = array2table([source1; source2; source3]);
mytable.Properties.VariableNames = {'X' 'Y' 'source_id'};

figure
hold on;
for ii = 1:max(mytable.source_id)
    rows = mytable.source_id==ii;
    x = mytable.X(rows);
    y = mytable.Y(rows);
    label = char(strcat('Source ID =', {' '}, num2str(ii)));
    mycolor = rand(1,3); 
    scatter(x,y, 'MarkerEdgeColor', mycolor, 'MarkerFaceColor', mycolor, 'DisplayName', label);
end
set(legend, 'Location', 'best')

How can I color-label the cluster data after GMM is fitted?

1 Answers1