Shouldn't the strncmp("end",input,3) == 0
return 0 if the input is end? It returns a number > 0 though.
#include <stdio.h>
int main(void) {
char *strArray[100];
int strLengths[100];
char input[100];
int flag = 0;
do {
scanf("%c",&input);
if(strncmp("end",input,3) == 0) {
printf("end\n");
}
printf("%d\n",strncmp("end",input,3));
} while(flag !=0);
return 0;
}