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I would like to reassure myself that what I'm doing is right. I am applying an LME model to my data. And I would like to know if the use of EMMEANS to get multiple comparisons is right. 

emmeans(mod1.lme, pairwise ~ Status, adjust="bonferroni")

The variable 'Status' has 4 factors, and I would like to know how to adjust my LME for 'Time since event' when only 2 of those factors are affected by that event. Would be enough to include na.action = na.omit at the end of the model or I should do anything else to control for that?

Nakx
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Lili
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  • Can you provide a sample of your data or explain in more detail what you are analyzing? What is "time since event"? – Nakx Nov 08 '18 at 01:32
  • Hello! actually I think this question is not very well explained. What I wanted to ask is what I have already asked in this: https://stackoverflow.com/questions/52553218/can-i-use-emmeans-with-lme-model Would you be able to help? I'd really appreciate it! Thanks! – Lili Nov 08 '18 at 15:43

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