I have written the code below to create a function that creates a file of N particle positions in the file .xyz format which can be used to display particle trajectories.
However I am a little unsure of a few things.
Firstly, I want to create and write a file so that it is displayed like so...
Point = 1
p1 x11 y11 z11
p2 x21 y21 z21
Where all the lines are strings and taking i = 1 and j = 1,2 in this instance.
I feel that I have most definitely incorrectly written the sections of code where I have to append the .xyz file.
I should also note that...
co_ord_data = particles[j].str()
returns 4 strings.
(Main Code)
def VMD_init(timestep, filename)
particle_trajectory = open("filename", "a+")
for i in range(timestep):
if i % 5:
particle_trajectory.write("Point = i")
for j in len(particles):
co_ord_data = particles[j].str()
particle_trajectory.write("co_ord_data")
else:
I hope I have managed to explain this clearly enough! Please feel free to reply asking me to try and explain it again.
Any help is much appreciated!
Thank you :-)