Firebase Simulated and actual rules differ

Question

I am using firebase realtime database and query data with firebase-query and firebase-document. I configured some rules, when ran in simulator the read is accepted but in real life read id denied. Have to ".read": true in root to get expected outcome. Note: i am using both polymerfire AND Firebase js sdk but for different things and JS is on external file and I am writing rules using Bolt compiler.

rules:

rules.bolt

 //Questions
 path /Question/{qid} {
  read() { true }
  write() { true}
 }

 //Users
 path /Users/{uid}/Profile {
  read() { true }
  write() { signedIn() && isUser(auth, uid) }
 }

 path /Users/{uid}/Metadata {
  read() { signedIn() && isUser(auth, uid) }
  write() { signedIn() && isUser(auth, uid) }
 }

 function signedIn (){ auth != null}

 function isUser (auth, userKey) {
  return auth.uid == userKey;
 }

rules.json

{
  "rules": {
    "Question": {
      "$qid": {
        ".read": "true",
        ".write": "true"
      }
    },
    "Users": {
      "$uid": {
        "Profile": {
          ".read": "true",
          ".write": "auth != null && auth.uid == $uid"
        },
        "Metadata": {
          ".read": "auth != null && auth.uid == $uid",
          ".write": "auth != null && auth.uid == $uid"
        }
      }
    }
  }
}

EXPECTATION

Stored value is initialised and the data can only be read from Questons/{{qid}} and Users/{{uid}}/Profile (and Users/{{uid}}/Metadata if the user is seeing him/hers won profile) and all the data is shown.

REALITY

When not used ".read": true:

Initializing stored value.

and no data is incoming though when ran in simulator read is granted.

When USED ".read": true:

Initializing stored value.
  Sync to memory.
  Updating data from Firebase value: {Metadata: {…}, Profile: {…}}
  Got stored value! {Metadata: {…}, Profile: {…}} {Metadata: {…}, 
  Profile: {…}}
Sync to memory.

and other datas are also incoming and are showing.

I think this is because of rules cascade.

If rules cascade is the case how to fix this up using Bolt and if not then what to do?