The OSCAT libraries is the biggest open code base written in IEC61131-3 afaik. They provide different libraries for different use cases and for different plc vendors
Furthermore there are some example programs available on Beckhoff Infosys. For almost every library they provide a sample section. One of the biggest samples is the OOP extension sample (OOP extensions are included in the new version of IEC61131-3, not sure if you are interested in it).
Another source of examples is the Codesys Store. They have some free and some paid examples.
And one more I like (but its only in german). M. Seitz the author of a good plc programming book provides some accompanying samples, one of them a bit bigger (coffee machine). There is also a simulation and control library available.