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Can someone instruct me how to produce a plot consisting of number of stochastic curves combined with deterministic curve for the same set of chemical reactions only by using particular icons (tabs) in simbiology?

I know how to draw deterministic curve for particular model

  • (SimBiology:Model:Add Task:Simulate model, and then choose solver i.e. ode)

And I know how to produce a bunch of stochastic curves

  • (SimBiology:Model:Add Task: Run ensemble simulation....)

But I don't know how to merge these curves (det. and stoch.) into one plot.

Tom Fuller
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Sneki
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1 Answers1

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Here's one way to do it:

  • Add a Simuation Task to your project
  • Turn on the live plots section (by clicking the Live Plots button in the toolstrip)
  • Enable overlaying of results in the Live Plots (by right-clicking on the live plot and selecting the menu option "Overlay Results")
  • Configure the simulation settings as desired (for example, click on the Simulation Settings button and switch between deterministic and stochastic solvers)
  • Run the task
  • Repeat the configuration and running of the task

You can find more information on the Live Plots here and here.

agoldsipe
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