Below is my project's structure:
spark-application:
scala1.scala // I am calling the java class from this class.
java.java // this will submit another spark application to the yarn cluster.
The spark-application that is being triggered by java class:
scala2.scala
My reference tutorial is here
When I run my java class from scala1.scala via spark-submit in the local mode the second spark application scala2.scala is getting triggered and working as expected.
But, when I run the same application via spark-submit in yarn cluster it is showing the below error!
Error: Could not find or load main class
org.apache.spark.deploy.yarn.ApplicationMaster
Application application_1493671618562_0072 failed 5 times due to AM Container for appattempt_1493671618562_0072_000005 exited with exitCode: 1
For more detailed output, check the application tracking page: http://headnode.internal.cloudapp.net:8088/cluster/app/application_1493671618562_0072 Then click on links to logs of each attempt.
Diagnostics: Exception from container-launch.
Container id: container_e02_1493671618562_0072_05_000001
Exit code: 1
Exception message: /mnt/resource/hadoop/yarn/local/usercache/helixuser/appcache/application_1493671618562_0072/container_e02_1493671618562_0072_05_000001/launch_container.sh: line 26: $PWD:$PWD/spark_conf:$PWD/spark.jar:$HADOOP_CONF_DIR:/usr/hdp/current/hadoop-client/:/usr/hdp/current/hadoop-client/lib/:/usr/hdp/current/hadoop-hdfs-client/:/usr/hdp/current/hadoop-hdfs-client/lib/:/usr/hdp/current/hadoop-yarn-client/:/usr/hdp/current/hadoop-yarn-client/lib/:$PWD/mr-framework/hadoop/share/hadoop/mapreduce/:$PWD/mr-framework/hadoop/share/hadoop/mapreduce/lib/:$PWD/mr-framework/hadoop/share/hadoop/common/:$PWD/mr-framework/hadoop/share/hadoop/common/lib/:$PWD/mr-framework/hadoop/share/hadoop/yarn/:$PWD/mr-framework/hadoop/share/hadoop/yarn/lib/:$PWD/mr-framework/hadoop/share/hadoop/hdfs/:$PWD/mr-framework/hadoop/share/hadoop/hdfs/lib/:$PWD/mr-framework/hadoop/share/hadoop/tools/lib/:/usr/hdp/${hdp.version}/hadoop/lib/hadoop-lzo-0.6.0.${hdp.version}.jar:/etc/hadoop/conf/secure: bad substitution
Stack trace: ExitCodeException exitCode=1: /mnt/resource/hadoop/yarn/local/usercache/helixuser/appcache/application_1493671618562_0072/container_e02_1493671618562_0072_05_000001/launch_container.sh: line 26: $PWD:$PWD/spark_conf:$PWD/spark.jar:$HADOOP_CONF_DIR:/usr/hdp/current/hadoop-client/:/usr/hdp/current/hadoop-client/lib/:/usr/hdp/current/hadoop-hdfs-client/:/usr/hdp/current/hadoop-hdfs-client/lib/:/usr/hdp/current/hadoop-yarn-client/:/usr/hdp/current/hadoop-yarn-client/lib/:$PWD/mr-framework/hadoop/share/hadoop/mapreduce/:$PWD/mr-framework/hadoop/share/hadoop/mapreduce/lib/:$PWD/mr-framework/hadoop/share/hadoop/common/:$PWD/mr-framework/hadoop/share/hadoop/common/lib/:$PWD/mr-framework/hadoop/share/hadoop/yarn/:$PWD/mr-framework/hadoop/share/hadoop/yarn/lib/:$PWD/mr-framework/hadoop/share/hadoop/hdfs/:$PWD/mr-framework/hadoop/share/hadoop/hdfs/lib/:$PWD/mr-framework/hadoop/share/hadoop/tools/lib/:/usr/hdp/${hdp.version}/hadoop/lib/hadoop-lzo-0.6.0.${hdp.version}.jar:/etc/hadoop/conf/secure: bad substitution
at org.apache.hadoop.util.Shell.runCommand(Shell.java:933)
at org.apache.hadoop.util.Shell.run(Shell.java:844)
at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:1123)
at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:225)
at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:317)
at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:83)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Container exited with a non-zero exit code 1
Failing this attempt. Failing the application.
My project's directory structure is given below:
lrwxrwxrwx 1 yarn hadoop 95 May 5 06:03 __app__.jar -> /mnt/resource/hadoop/yarn/local/filecache/10/sparkfiller-1.0-SNAPSHOT-jar-with-dependencies.jar
-rw-r--r-- 1 yarn hadoop 74 May 5 06:03 container_tokens
-rwx------ 1 yarn hadoop 710 May 5 06:03 default_container_executor_session.sh
-rwx------ 1 yarn hadoop 764 May 5 06:03 default_container_executor.sh
-rwx------ 1 yarn hadoop 6433 May 5 06:03 launch_container.sh
lrwxrwxrwx 1 yarn hadoop 102 May 5 06:03 __spark_conf__ -> /mnt/resource/hadoop/yarn/local/usercache/helixuser/filecache/80/__spark_conf__6125877397366945561.zip
lrwxrwxrwx 1 yarn hadoop 125 May 5 06:03 __spark__.jar -> /mnt/resource/hadoop/yarn/local/usercache/helixuser/filecache/81/spark-assembly-1.6.3.2.5.4.0-121-hadoop2.7.3.2.5.4.0-121.jar
drwx--x--- 2 yarn hadoop 4096 May 5 06:03 tmp
find -L . -maxdepth 5 -ls:
3933556 4 drwx--x--- 3 yarn hadoop 4096 May 5 06:03 .
3933558 4 drwx--x--- 2 yarn hadoop 4096 May 5 06:03 ./tmp
3933562 4 -rw-r--r-- 1 yarn hadoop 60 May 5 06:03 ./.launch_container.sh.crc
3933517 185944 -r-x------ 1 yarn hadoop 190402950 May 5 06:03 ./__spark__.jar
3933564 4 -rw-r--r-- 1 yarn hadoop 16 May 5 06:03 ./.default_container_executor_session.sh.crc
3933518 4 drwx------ 2 yarn hadoop 4096 May 5 06:03 ./__spark_conf__
3933548 4 -r-x------ 1 yarn hadoop 945 May 5 06:03 ./__spark_conf__/taskcontroller.cfg
3933543 4 -r-x------ 1 yarn hadoop 249 May 5 06:03 ./__spark_conf__/slaves
3933541 4 -r-x------ 1 yarn hadoop 2316 May 5 06:03 ./__spark_conf__/ssl-client.xml.example
3933520 4 -r-x------ 1 yarn hadoop 1734 May 5 06:03 ./__spark_conf__/log4j.properties
3933526 4 -r-x------ 1 yarn hadoop 265 May 5 06:03 ./__spark_conf__/hadoop-metrics2-azure-file-system.properties
3933536 4 -r-x------ 1 yarn hadoop 1045 May 5 06:03 ./__spark_conf__/container-executor.cfg
3933519 8 -r-x------ 1 yarn hadoop 5685 May 5 06:03 ./__spark_conf__/hadoop-env.sh
3933531 4 -r-x------ 1 yarn hadoop 2358 May 5 06:03 ./__spark_conf__/topology_script.py
3933547 8 -r-x------ 1 yarn hadoop 4113 May 5 06:03 ./__spark_conf__/mapred-queues.xml.template
3933528 4 -r-x------ 1 yarn hadoop 744 May 5 06:03 ./__spark_conf__/ssl-client.xml
3933544 4 -r-x------ 1 yarn hadoop 417 May 5 06:03 ./__spark_conf__/topology_mappings.data
3933549 4 -r-x------ 1 yarn hadoop 342 May 5 06:03 ./__spark_conf__/__spark_conf__.properties
3933523 4 -r-x------ 1 yarn hadoop 247 May 5 06:03 ./__spark_conf__/hadoop-metrics2-adl-file-system.properties
3933535 4 -r-x------ 1 yarn hadoop 1020 May 5 06:03 ./__spark_conf__/commons-logging.properties
3933525 24 -r-x------ 1 yarn hadoop 22138 May 5 06:03 ./__spark_conf__/yarn-site.xml
3933529 4 -r-x------ 1 yarn hadoop 2450 May 5 06:03 ./__spark_conf__/capacity-scheduler.xml
3933538 4 -r-x------ 1 yarn hadoop 2490 May 5 06:03 ./__spark_conf__/hadoop-metrics.properties
3933534 12 -r-x------ 1 yarn hadoop 8754 May 5 06:03 ./__spark_conf__/hdfs-site.xml
3933533 8 -r-x------ 1 yarn hadoop 4261 May 5 06:03 ./__spark_conf__/yarn-env.sh
3933532 4 -r-x------ 1 yarn hadoop 1335 May 5 06:03 ./__spark_conf__/configuration.xsl
3933530 4 -r-x------ 1 yarn hadoop 758 May 5 06:03 ./__spark_conf__/mapred-site.xml.template
3933545 4 -r-x------ 1 yarn hadoop 1000 May 5 06:03 ./__spark_conf__/ssl-server.xml
3933527 8 -r-x------ 1 yarn hadoop 4680 May 5 06:03 ./__spark_conf__/core-site.xml
3933522 8 -r-x------ 1 yarn hadoop 5783 May 5 06:03 ./__spark_conf__/hadoop-metrics2.properties
3933542 4 -r-x------ 1 yarn hadoop 1308 May 5 06:03 ./__spark_conf__/hadoop-policy.xml
3933540 4 -r-x------ 1 yarn hadoop 1602 May 5 06:03 ./__spark_conf__/health_check
3933537 8 -r-x------ 1 yarn hadoop 4221 May 5 06:03 ./__spark_conf__/task-log4j.properties
3933521 8 -r-x------ 1 yarn hadoop 7596 May 5 06:03 ./__spark_conf__/mapred-site.xml
3933546 4 -r-x------ 1 yarn hadoop 2697 May 5 06:03 ./__spark_conf__/ssl-server.xml.example
3933539 4 -r-x------ 1 yarn hadoop 752 May 5 06:03 ./__spark_conf__/mapred-env.sh
3932820 135852 -r-xr-xr-x 1 yarn hadoop 139105807 May 4 22:53 ./__app__.jar
3933566 4 -rw-r--r-- 1 yarn hadoop 16 May 5 06:03 ./.default_container_executor.sh.crc
3933563 4 -rwx------ 1 yarn hadoop 710 May 5 06:03 ./default_container_executor_session.sh
3933559 4 -rw-r--r-- 1 yarn hadoop 74 May 5 06:03 ./container_tokens
3933565 4 -rwx------ 1 yarn hadoop 764 May 5 06:03 ./default_container_executor.sh
3933560 4 -rw-r--r-- 1 yarn hadoop 12 May 5 06:03 ./.container_tokens.crc
3933561 8 -rwx------ 1 yarn hadoop 6433 May 5 06:03 ./launch_container.sh
broken symlinks(find -L . -maxdepth 5 -type l -ls):
Below is the java code that invokes the second Spark application:
import org.apache.spark.deploy.yarn.Client;
import org.apache.spark.deploy.yarn.ClientArguments;
import org.apache.hadoop.conf.Configuration;
import org.apache.spark.SparkConf;
import org.apache.spark.SparkException;
public class CallingSparkJob {
public void submitJob(String latestreceivedpitrL,String newPtr) throws Exception {
System.out.println("In submit job method");
try{
System.out.println("Building a spark command");
// prepare arguments to be passed to
// org.apache.spark.deploy.yarn.Client object
String[] args = new String[] {
// the name of your application
"--name",
"name",
// "--master",
// "yarn",
// "--deploy-mode",
// "cluster",
// "--conf", "spark.yarn.executor.memoryOverhead=600", "--conf",
"spark.yarn.submit.waitAppCompletion=false",
// memory for driver (optional)
"--driver-memory",
"1000M",
"--num-executors",
"2",
"--executor-cores",
"2",
// path to your application's JAR file
// required in yarn-cluster mode
"--jar",
"wasb://storage_account_container@storageaccount.blob.core.windows.net/user/ankushuser/sparkfiller/sparkfiller-1.0-SNAPSHOT-jar-with-dependencies.jar",
// name of your application's main class (required)
"--class",
"com.test.SparkFiller",
// comma separated list of local jars that want
// SparkContext.addJar to work with
// "--addJars",
// "/Users/mparsian/zmp/github/data-algorithms-book/lib/spark-assembly-1.5.2-hadoop2.6.0.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/log4j-1.2.17.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/junit-4.12-beta-2.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/jsch-0.1.42.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/JeraAntTasks.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/jedis-2.5.1.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/jblas-1.2.3.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/hamcrest-all-1.3.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/guava-18.0.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-math3-3.0.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-math-2.2.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-logging-1.1.1.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-lang3-3.4.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-lang-2.6.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-io-2.1.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-httpclient-3.0.1.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-daemon-1.0.5.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-configuration-1.6.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-collections-3.2.1.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/commons-cli-1.2.jar,/Users/mparsian/zmp/github/data-algorithms-book/lib/cloud9-1.3.2.jar",
// argument 1 for latestreceivedpitrL
"--arg",
latestreceivedpitrL,
// argument 2 for newPtr
"--arg",
newPtr,
"--arg",
"yarn-cluster"
};
System.out.println("create a Hadoop Configuration object");
// create a Hadoop Configuration object
Configuration config = new Configuration();
// identify that you will be using Spark as YARN mode
System.setProperty("SPARK_YARN_MODE", "true");
// create an instance of SparkConf object
SparkConf sparkConf = new SparkConf();
sparkConf.setSparkHome("/usr/hdp/current/spark-client");
// sparkConf.setMaster("yarn");
sparkConf.setMaster("yarn-cluster");
// sparkConf.setAppName("spark-yarn");
// sparkConf.set("master", "yarn");
// sparkConf.set("spark.submit.deployMode", "cluster"); // worked
// create ClientArguments, which will be passed to Client
// ClientArguments cArgs = new ClientArguments(args);
ClientArguments cArgs = new ClientArguments(args, sparkConf);
// create an instance of yarn Client client
Client client = new Client(cArgs, config, sparkConf);
// submit Spark job to YARN
client.run();
}catch(Exception e){
System.out.println("Error submitting spark Job");
System.out.println(e.getMessage());
}
}
}
The spark-submit command used to run the first spark application locally:
spark-submit --class scala1 --master yarn --deploy-mode cluster --num-executors 2 --executor-cores 2 --conf spark.yarn.executor.memoryOverhead=600 --conf spark.yarn.submit.waitAppCompletion=false /home/ankushuser/kafka_retry/kafka_retry_test/sparkflightaware/target/sparkflightaware-0.0.1-SNAPSHOT-jar-with-dependencies.jar
If I run this spark-submit command locally it is invoking the java class and the spark-submit command for the second scala2 application is working fine.
If I run it in yarn mode, then I am facing the issue.
Thank you for your help.
