I am trying to use the TimeSeriesSplit cross-validation strategy in sklearn version 0.18.1 with a LogisticRegression estimator. I get an error stating that:
cross_val_predict only works for partitions
The following code snippet shows how to reproduce:
from sklearn import linear_model, neighbors
from sklearn.model_selection import train_test_split, cross_val_predict, TimeSeriesSplit, KFold, cross_val_score
import pandas as pd
import numpy as np
from datetime import date, datetime
df = pd.DataFrame(data=np.random.randint(0,10,(100,5)), index=pd.date_range(start=date.today(), periods=100), columns='x1 x2 x3 x4 y'.split())
X, y = df['x1 x2 x3 x4'.split()], df['y']
score = cross_val_score(linear_model.LogisticRegression(fit_intercept=True), X, y, cv=TimeSeriesSplit(n_splits=2))
y_hat = cross_val_predict(linear_model.LogisticRegression(fit_intercept=True), X, y, cv=TimeSeriesSplit(n_splits=2), method='predict_proba')
What am I doing wrong?