I have the following plot as you can see in the picture, Is there any way to see exact number of percentage in the leaf nodes?
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If you want to "see" the percentages, the easiest way is to make a table()
of the terminal nodes vs. the response and then look at the conditional proportions.
If you want to "see" the proportions in the barplot, then there was no possibility to do this up to now. However, I tweaked the node_barplot()
function to accomodate this feature. So if you re-install the partykit
package (successor of the party
package) from R-Forge you can try it:
install.packages("partykit", repos = "http://R-Forge.R-project.org")
library("partykit")
For illustration I will just use the iris
data:
ct <- ctree(Species ~ ., data = iris)
plot(ct, tp_args = list(text = TRUE))
By enabling the text = TRUE
option you get the labels drawn above the bars (horizontally). An equivalent specification would be text = "horizontal"
or text = "h"
. If you want a narrower layout you could also use:
plot(ct, tp_args = list(text = "vertical", ymax = 1.5))
And the frequency table is simply:
tab <- table(predict(ct, type = "node"), iris$Species)
prop.table(tab, 1) * 100
## setosa versicolor virginica
## 2 100.000000 0.000000 0.000000
## 5 0.000000 97.826087 2.173913
## 6 0.000000 50.000000 50.000000
## 7 0.000000 2.173913 97.826087

Achim Zeileis
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2Error in terminal_panel(
, text = "vertical", : unused argument (text = "vertical") – Sina PN Oct 13 '16 at 16:17 -
Sorry Achim, my mistake. need to redo decision trees with "partykit" instead of "party"...Thanks for your help – Sina PN Oct 13 '16 at 16:25
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Yes, the infrastructure has been entirely rewritten, see `vignette("partykit", package = "partykit")` and `vignette("ctree", package = "partykit")` for an overview and some guidance. – Achim Zeileis Oct 13 '16 at 20:04
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Could you provide more details? For me in R 3.4.3 using the CRAN version of `partykit` (1.2-0) everything runs smoothly. – Achim Zeileis Jan 20 '18 at 21:50