For a given vector I would like to find the orthogonal basis around it, i.e. the given vector normalized and randomly chosen basis of orthogonal sub-space. Is there a convenient function for this in Julia?
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9
The function you are looking for is called nullspace
.
julia> x = randn(5);
julia> x⊥ = nullspace(x');
julia> x'x⊥
1×4 Array{Float64,2}:
7.69373e-16 -5.45785e-16 -4.27252e-17 1.26778e-16

Andreas Noack
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Indeed! (Also, pretty obvious..) And with the normalized `x` the full basis will be: `hcat(x / sqrt(x'x), nullspace(x'))'` – xealits Sep 20 '16 at 14:17
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2`x'` used to create a row matrix and it now just creates a `Adjoint` of the vector. You can make it work on recent versions of Julia with `nullspace(Matrix(x'))`. An attempt to make `nullspace(x')` work can be found in https://github.com/JuliaLang/julia/pull/33385/ – Benoît Legat Sep 27 '19 at 10:14
8
You could define a function orth (if someonehasn't already done this)
orth(M) = qr(M)[1]
See here: https://groups.google.com/forum/#!topic/julia-users/eG6a4tj7LGg and http://docs.julialang.org/en/release-0.4/stdlib/linalg/
Or from IterativeSolvers.jl:
orthogonalize{T}(v::Vector{T}, K::KrylovSubspace{T})

Alexander Morley
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1I seriously doubt you're going back to medicine after the PhD, Alex :D (where excel sheets are considered IT wizardry) – Tasos Papastylianou Sep 19 '16 at 23:40
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1thanks for suggestions! but I'll accept the answer with `nullspace` -- it's pretty basic, but fits the problem perfectly and should not be forgotten – xealits Sep 20 '16 at 14:27
2
The following will calculate an orthogonal basis for matrix M
function orth(M::Matrix)
matrixRank = rank(M)
Ufactor = svdfact(M)[:U]
return Ufactor[:,1:matrixRank]
end
With julia documentation:
"""
orth(M)
Compute an orthogonal basis for matrix `A`.
Returns a matrix whose columns are the orthogonal vectors that constitute a basis for the range of A.
If the matrix is square/invertible, returns the `U` factor of `svdfact(A)`, otherwise the first *r* columns of U, where *r* is the rank of the matrix.
# Examples
```julia
julia> orth([1 8 12; 5 0 7])
2×2 Array{Float64,2}:
-0.895625 -0.44481
-0.44481 0.895625
```
```
julia> orth([1 8 12; 5 0 7 ; 6 4 1])
3×3 Array{Float64,2}:
-0.856421 0.468442 0.217036
-0.439069 -0.439714 -0.783498
-0.27159 -0.766298 0.582259
```
"""
function orth(M::Matrix)
matrixRank = rank(M)
Ufactor = svdfact(M)[:U]
return Ufactor[:,1:matrixRank]
end

RaidenF
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