The latex hyperref package makes a really nice, linked table of contents, named according to section name. However, the top level category is by default, the file name. It seems I should be able to change this to the actual title, but I'm not finding any information on how.
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Are you sure this is not a 'feature' of your PDF reader? It might try to use the PDFs title (unset by default), which you can set like this:
\hypersetup{
pdftitle = {The title},
pdfauthor = {You}
}
You might also want to check out the TeX StackExchange.
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Indeed, it was the reader (Preview, Mac) causing the problem. Also good point on the TeX SE. – muckabout Oct 08 '10 at 13:04