I am facing problems in python after installing QGIS. While installing QGIS, it mentioned that it would override my matplotlib and numpy python libraries. I am facing trouble with executing python programs through these overrided libraries. I have tried to uninstall these python libraries using sudo pip uninstall. But it says operation not permitted. Maybe QGIS has modified the sudo settings for these 2 libraries because I am able to add/delete any other python library. I am okay to uninstall QGIS. Can any one share any ideas whats going wrong and how can I restore my numpy and matplotlib libraries to the original versions by python from the versions overrided by QGIS?
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did you try this from kyngchaos numpy readme? Uninstall Drag the numpy-override folder and numpy-override.pth file from /Library/Python/2.7/site-packages to the Trash. Run this command in a Terminal: sudo pkgutil --forget org.scipy.numpy-lion – Dominik Jul 18 '17 at 07:42
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Tried. Get this error: “numpy” can’t be modified or deleted because it’s required by macOS – nicolai.tesela Sep 28 '17 at 16:52
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This has happened to a lot of people, including myself. I had to remove the file `numpy-override` inside my python version's `site-packages` folder first and then reinstalled `numpy`. Take a look at [this post](https://stackoverflow.com/questions/48052734/possible-to-circumvent-numpy-override-pth-for-python#comment83077801_48052734) for some guidance. – Abdou Jul 13 '18 at 23:52