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I've been working on a Protein Secondary Structures Prediction Project. I am unable to find the RS 126 dataset online. I found a list of proteins in that database. I am looking for the same proteins after running a PSI BLAST search on them and in *.mat (MATLAB dataset) format.

Thanks!

Xerneas
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I can point you to the legacy Jpred2 website. It is not exactly what you want, but the first dataset (513_distribute.tar.gz) contains 117 of the 126 proteins in the RS126 dataset and you should read the paper for details. It is also not in .mat format, but parsing it is trivial - let me know if you need help with that.

tbrittoborges
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