If I understand correctly, you're trying to convert a number from base 10 to base 4, and then display it as a number, but there are several problems with your implementation.
You're building a list as output - but that's not what you want, you want a number. Also, you're traversing the input in the wrong order, and that's not the correct way to find the quotient between two numbers. Perhaps this will help:
(define (func X)
(let loop ((n X) (acc 0) (mult 1))
(if (< n 4)
(+ (* mult n) acc)
(loop (quotient n 4)
(+ (* mult (modulo n 4)) acc)
(* mult 10)))))
Alternatively, you could output a string to stress the fact that the output is not in base 10:
(define (func X)
(let loop ((n X) (acc ""))
(if (< n 4)
(string-append (number->string n) acc)
(loop (quotient n 4)
(string-append (number->string (modulo n 4)) acc)))))
It'll work as expected:
(func 16)
=> 100