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John Smith
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I could only guess with the information provided. Update you post with Error logs (**Help > Troubleshooting > View Log File**), version of Komodo (**Help > About Komodo**), and OS type and version. Now the part where I guess: Try changing the Icon set in your preferences: **Edit > Preferences > Appearance: Icon Set** – th3coop Jan 19 '16 at 16:33
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Had the same problem. Issue was that the upgrade occurred as root. Part of the ~/.komodoide/9.3/ items were owned by root. chown user:group * -R fixed me right up.

Dennis
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Correct me if I'm wrong but John is using Windows, not Linux @Dennis. It does having something to do with the profile but it's your answer won't help. – th3coop Jan 21 '16 at 21:28