0

I have installed python and many other useful tools on my Ubuntu 14.04 using Anaconda. I installed pysam (htslib interface for python) using

conda install pysam

However this installs the old version (0.6). The current version is 0.8.4. How can I install that version using conda. I don't want to use pip install pysam because I read somewhere it might cause problems.

Thanks.

user513951
  • 12,445
  • 7
  • 65
  • 82
user2725109
  • 2,286
  • 4
  • 27
  • 46

1 Answers1

2

Anaconda only provides version 0.6. You can install from binstar with:

conda install -c https://conda.anaconda.org/uhlitz pysam

This should give you version 0.8.3 for linux64. Other channels are also available.

Mike Müller
  • 82,630
  • 20
  • 166
  • 161