i'am using the last version of pellet reasoner with OWL API:
OWLOntologyManager manager=OWLManager.createOWLOntologyManager();
OWLOntology fist_ontology=manager.loadOntologyFromOntologyDocument.........
................
OWLOntology last_ontology=manager.loadOntologyFromOntologyDocument..........
reasoner=PelletReasonerFactory.getInstance().createReasoner(last_ontology);
manager.addOntologyChangeListener(reasoner);
Several ontologies are loaded with the manager. Now I need to save in a file all of the inferences made by Pellet for all of the ontologies loaded with the manager, but I can not find any example. Someone can help me ? Thank you !