I am using a web application which is running in Apache Tomcat 6.0.44 uses oracle jre1.7u72. I've followed the below steps to sign the server certificate using self created CA.followed the steps from this link
creation of own CA
openssl genrsa -des3 -out ca.key 4096
openssl req -new -x509 -days 365 -key ca.key -out ca.crt
openssl genrsa -des3 -out server.key 4096
openssl req -new -key server.key -out server.csr
openssl x509 -req -days 365 -in server.csr -CA ca.crt -CAkey ca.key -set_serial 01 -out server.crt
deleting the old certificate using keytool command
keytool -list -keystore <path of the keystore file> -alias aliasname -storepass password
importing the newly created server certificate signed by own CA
keytool -importcert -keystore <path of the keystore> -alias alias -storepass password -file server.crt
and obtained the follow error Secure Connection Failed
An error occurred during a connection to x.x.x.x. Cannot communicate securely with peer: no common encryption algorithm(s). (Error code: ssl_error_no_cypher_overlap)