The version of Signtool shipped with the Windows 10 SDK includes the capability to embed a signed hash into an exe.
From the following page:
https://vcsjones.com/2017/05/07/custom-authenticode-signing/
Starting in the Windows 10 SDK, two new command line switches are available, dg
and di
. Recall that a signature is always performed on a hash on Authenticode. The dg
option changes signtool’s behavior to output a digest that you can sign using anything you’d like. Let’s try this on a copy of notepad.exe.
signtool sign /dg "C:\scratch\dir" /fd SHA256 /f public-cert.cer notepad.exe
This takes a file to a public certificate - there is no key in
public-cert.cer. You could also use the /sha1
option to specify a
certificate in the certificate store that also has only a public key.
This will output a few files in the “C:\scratch\dir” directory. The
digest is the one with the “.dig” extension. This file will have the
Base64 encoded digest to sign. Next, using your custom tool, sign the
digest with the private key for the certificate. You should decode the
Base64 signature before signing if the signing API expects a raw
binary digest.
Next, encode your signature in base64 and place it in a file in the
“C:\scratch\dir” directory with the same name as the digest file, with
the “signed” extension. For example, “notepad.exe.dig.signed”.
The next step is to ingest the signed digest along with the rest of
the Authenticode signature to complete the signing.
signtool sign /di "C:\scratch\dir" notepad.exe
This will complete the signing process, and we now have our own signed
copy of notepad.exe. Appending a signature is done just as before,
except with the /as
flag.
This provides great flexibility for signers to use non CSP / CNG
signing options, or offloading the signing process. Signtool can now
also sign just a plain digest file using the /ds
option. If you have a
dedicated server for performing Authenticode signing, you can now use
the /dg
, /ds
, /di
options so that only a very small file needs to be
moved to the signing server, instead of the entirely binary if they
are large in size.