Both Traceur and Typescript transpiles have very similar features, with some pros and cons.
I believe that the main questions to be answered, analyzed and compared more deeply are: "Who are its proponents?" and "What is the historic of every one of them?".
Q1: Well, both are big and reputable companies with large investment in technology, workforce to give future to their transpiles. Google is behind the Traceur and Microsoft is behind Typescript.
Q2.1: Google has a history as a strong supporter of open source frameworks such as Chromium (the open source browser base of Google Chrome) and thousands of free APIs available, almost all based on open standards. The Traceur follows this same logic adopting guidelines of ECMAScript 6 specification, anticipating it and ensuring its compatibility in future revisions.
Q2.2: Microsoft has a history of encompass standards and extend them proprietary, creating dependence on customers in their platform and not respecting a shared vision of standardization of other market players. The main objective of Typescript is compatibilize the other compilers on the market with the syntax and features of your JScript.NET compiler, not with the ECMAScript 6. Any mention of ECMA is just "sugar for ants".
The realtime typed parsing and the advanced code completion of Typescript are a considerable advantage for small projects, but larger projects need to take a right decision during the architecture definition, otherwise the entire project could be compromised by a compiler outdated or discontinued and out of standards, depending on an unique vendor.
However, many features of ECMAScript 6 are just implemented on the Firefox 33 and Chrome 38 current versions (in 2014-10).
http://kangax.github.io/compat-table/es6/