<!DOCTYPE html>
<html>
<head>
<meta name="description" content="[Visual style example]" />
<script src="http://ajax.googleapis.com/ajax/libs/jquery/1/jquery.min.js"></script>
<meta charset=utf-8 />
<title>Visual style example</title>
<script src="cytoscape.js-2.0.2/cytoscape.min.js"></script>
<script type="text/javascript" src="cytoscape.js-2.0.2/arbor.js"></script>
<?php
$fileName=$_GET['fileName'];
//$fileName="usrID/id_1378400413_14_gene_iterm.txt";
echo '<script src="data.php?fileName='.$fileName.'"></script>';
?>
<!--<script src="try.js"></script>-->
<!--<script src="<?php echo shell_exec('python data.py 2>&1'); ?>"></script>-->
<script>
$(function(){
var cy = $("#cy").cytoscape("get");
cy.layout({ name: 'random' });
})
</script>
<link rel="stylesheet" type="text/css" href="style.css">
</head>
<body>
<div id="cy"></div>
</body>
</html>
I have no problem to use normal, grid, and other layout method, but I don't know why I can not use arbor layout method in my script even I include the arbor.js in a seperated tag. see The arbor.js was download from https://github.com/cytoscape/cytoscape.js/wiki/Downloads, and put all the scripts in cytoscape.js-2.02 into folder cytoscape. There is no directory path issue.
Anyone who know what's my problem. Is there any more layout method I can use? such as Radial Tree CompoundSpringEmbedder: My data is big, I need to find the most suitable layout method, now, it seems normal, grid, breadthfirst not works very well for me. Thanks.
