I'm trying to select a user-defined area and fill with 1s, preferably with mouse input. Any suggestion how? Thanks.
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You'll need the Image Processing Toolbox to use roipoly
as Georg suggested.
If you don't have that, you could try creating a rubber band box using
rbbox
There's a good example in the help. You might need to fiddle with units depending on how you're displaying your data. Remember to click and hold, drag and release..

Justin
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