I do configuration in iis in cognos 10. But I dont find web config file in cgi-bin folder. How can I find it?
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This Microsoft KB article is good at helping identify the various locations the IIS config files might exist at: http://technet.microsoft.com/en-us/library/cc754617%28WS.10%29.aspx
In my experience the web.config is placed at the location that your Application (not Virtual Directory) is configured, though not always.

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Web.config would exist in your base VD, unless there are specific settings for cgi-bin. In IIS every folder, can have its own web.config, but Cognos usually needs just one (if any). – Darek Jul 30 '12 at 23:48