I developed a JavaFx Desktop program the employees of the company. Now, they want to use the program in their houses with their own personal computers. The program has MySQL and FTP services.
I need to use SSH Tunnel or VPN so that the program can connect from outside to the remote server in the office(port forwarding for FTP and MySQL).
If I want to use SSH Tunnel I have to install(or copy/paste) the certificates in the own employees' computers and I think that this option is dangerous because of the certificates can be engaged to attacks of their computers.
Sometimes I have thought to create one certificate for each employee (100 people) to control better who is connected in each time, but it's too much laborious to maintain.
I would like to use SSH Tunnel but I don't know if the best option in this situation.
What other options can I use to connect my program to remote server securely?