SroC RNA
The bacterial SroC RNA is a non-coding RNA gene of around 160 nucleotides in length. SroC is found in several enterobacterial species. This RNA interacts with the Hfq protein.
| sroC RNA | |
|---|---|
Predicted secondary structure and sequence conservation of sroC | |
| Identifiers | |
| Symbol | sroC |
| Rfam | RF00369 |
| Other data | |
| RNA type | Gene; sRNA |
| Domain(s) | Bacteria |
| SO | SO:0000655 |
| PDB structures | PDBe |
SroC acts as a ‘sponge,’ and base pairs with and regulates activity of the sRNA GcvB. This interaction triggers the degradation of GcvB by RNase E, alleviating the GcvB-mediated mRNA repression of other amino acid-related transport and metabolic genes.
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