Intermediate filament
Intermediate filaments (IFs) are cytoskeletal structural components found in the cells of vertebrates, and many invertebrates. Homologues of the IF protein have been noted in an invertebrate, the cephalochordate Branchiostoma.
Intermediate filament tail domain | |||||||||
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Structure of lamin a/c globular domain | |||||||||
Identifiers | |||||||||
Symbol | IF_tail | ||||||||
Pfam | PF00932 | ||||||||
InterPro | IPR001322 | ||||||||
PROSITE | PDOC00198 | ||||||||
SCOP2 | 1ivt / SCOPe / SUPFAM | ||||||||
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Intermediate filament rod domain | |||||||||
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Human vimentin coil 2b fragment (cys2) | |||||||||
Identifiers | |||||||||
Symbol | Filament | ||||||||
Pfam | PF00038 | ||||||||
InterPro | IPR016044 | ||||||||
PROSITE | PDOC00198 | ||||||||
SCOP2 | 1gk7 / SCOPe / SUPFAM | ||||||||
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Intermediate filament head (DNA binding) region | |||||||||
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Identifiers | |||||||||
Symbol | Filament_head | ||||||||
Pfam | PF04732 | ||||||||
InterPro | IPR006821 | ||||||||
SCOP2 | 1gk7 / SCOPe / SUPFAM | ||||||||
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Peripherin neuronal intermediate filament protein | |||||||
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Identifiers | |||||||
Symbol | PRPH | ||||||
Alt. symbols | NEF4 | ||||||
NCBI gene | 5630 | ||||||
HGNC | 9461 | ||||||
OMIM | 170710 | ||||||
RefSeq | NM_006262.3 | ||||||
UniProt | P41219 | ||||||
Other data | |||||||
Locus | Chr. 12 q13.12 | ||||||
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Nestin neuronal stem cell intermediate filament protein | |||||||
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Identifiers | |||||||
Symbol | NES | ||||||
NCBI gene | 10763 | ||||||
HGNC | 7756 | ||||||
OMIM | 600915 | ||||||
RefSeq | NP_006608 | ||||||
UniProt | P48681 | ||||||
Other data | |||||||
Locus | Chr. 1 q23.1 | ||||||
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Intermediate filaments are composed of a family of related proteins sharing common structural and sequence features. Initially designated 'intermediate' because their average diameter (10 nm) is between those of narrower microfilaments (actin) and wider myosin filaments found in muscle cells, the diameter of intermediate filaments is now commonly compared to actin microfilaments (7 nm) and microtubules (25 nm). Animal intermediate filaments are subcategorized into six types based on similarities in amino acid sequence and protein structure. Most types are cytoplasmic, but one type, Type V is a nuclear lamin. Unlike microtubules, IF distribution in cells show no good correlation with the distribution of either mitochondria or endoplasmic reticulum.