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Questions tagged [venn-diagram]

For questions about Venn diagrams.

377 questions
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How to draw Venn diagram using R

I have three lists of IDs. I would like to compare the 3 lists,and draw a Venn diagram. In the Venn diagram obtained I would show in the intersection not numbers but ID's. I need to do that in R, but I really do not know how. Could you help…
Jack
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Calculate venn diagram hypergeometric p value using R

Hi，I saw someone calculate venn diagram overlap p-value as in the following example. They use hypergeometric distribution and R. When I apply their function in R, I just cannot get the same results. Can anyone help me about this? The sample I saw in…
user2700418
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Show counts in Venneuler R package

Does anybody know how to display the count of each subset in a Venneuler plot? Also, how can I write the labels next to the circles instead of the default setting (inside the circles)? Thanks very much!! Here's an example from the package manual: vd…
user907725
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Side-by-side Venn diagram using Vennerable

I am trying to put two Venn diagrams in one single graph, i.e. I am using par(mfrow=c(1,2)) at the very beginning. However, when I use the Venn() function in the Vennerable package: VennCompare = Venn(SetNames = c("A", "B", "C"), Weight = c(0, 38,…
alittleboy
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How to change the label position when plotting venn diagram from eulerr package in R?

I am trying to create a scaled venn diagram using the eulerr package in R. My Code is below: plot(euler(c( "LUTS"=98, "Symptoms of UTI"=46, "Positive urine culture"=39, "Symptoms of UTI&LUTS"=33, "LUTS&Positive urine culture"=24, …
Kathleen M
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Venn diagrame from contingency table in R

I have a data like contingency table, which display abundance of data, but I want to draw venn diagram from this data fram. Structure of my data: species_abundance<-data.frame(Genus = c("Parasphingorhabdus", "Loktanella", "Cytobacillus",…
Umar
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Create a Venn Diagram in R to represent rows with the same value from a dataframe

I want to create a Venn Diagram in R that represent the interesection between three columns of a dataframe, i.e. that represent how many observations are "1" for each pairwise comparison and also between the three groups. Here is a reproducible…
userq8957289475
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Venn diagram (4 sets) with R: problem with percentages

I am trying to draw a Venn diagram with four logical variables. I have tried many different R packages but with each of them I have faced some problems. So far, the best result I have achieved by using the ggvenn package. However, the problem is,…
HazelJay
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How to add count values in venn diagram for more than 6 sets?

I used following code to generate the sets for more than 5 groups: library(venneuler) H=list('ASD'=c("SCN3A", "TSC2", "RASSF8", "XDH", "CNTN5", "CHD7", "DPYD", "BUB1", "DPP4", "AMPD1", "ARID4A", "QSER1", "OCA2", "GPR141", "DNAH9", "LOXHD1", "SETX",…
user2110417
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Overlapping two gene sets ,finding their overlap significance and plotting them

(Fig. 3a, b, Extended Data Fig. 3a, b and Supplementary Table 1). After 48 h, more than one-third of the transcriptome was differentially expressed (>5,000 genes; 405 genes encoding for proteins in the extracellular region, Gene Ontology (GO)…
PesKchan
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Function for logical table

So I have this function for logical (venn diagrams) calculation but I cant make function universal for any dataframe of any size.. This function only work for provided dataframe (only four columns) how_much = 5000000 A <- sample(how_much, replace =…
Thomas Kyle
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How do you remove data labels in matplotlib_venn?

Not the text labels outside the circles, I can remove them by changing them to empty strings. I mean the actual numbers on the circles showing the value of each patch. I can't find how to remove these. Is there a way? Or is there a way to change the…
user43107
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Venn Diagram for Natural Join

I've been trying to understand the concept of sql joins fully, venn diagrams have helped me a lot to do that. I've found them for all kind of joins but not for natural joins. How would a venn diagram for a natural join look like?
Irina Crabbs
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Changing what is displayed inside a Venn diagram

I am using the Matplotlib_venn package to make a few Venn diagrams representing the overlaps of three different sets (hence using Venn3). When I use plt.show() and create the Venn diagram, the numbers that are displayed on the inside of each part…
user7600729
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R graphics: How to make objects from VennDiagram compatible with cowplot plot_grid?

I am making Venn diagrams with the VennDiagram package. They are coming out OK: library(VennDiagram) library(cowplot) png("p.png") p = draw.pairwise.venn(30,20,11, category = c("Dogs", "Cats"), lty = rep("blank", 2), fill = c("light blue",…
phlatphish
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