Questions tagged [snomed-ct]

The "Systematized Nomenclature of Medicine -- Clinical Terms" (SNOMED CT) is a comprehensive terminology for recording clinical information. It works as "The Global Language of Healthcare".

SNOMED CT (Systematized Nomenclature of Medicine -- Clinical Terms) is a standardized, multilingual vocabulary of clinical terminology that is used by physicians and other health care providers for the electronic exchange of clinical health information.

SNOMED CT is the most comprehensive and precise clinical health terminology product in the world, owned and distributed around the world by SNOMED International.

SNOMED CT has been developed collaboratively to ensure it meets the diverse needs and expectations of clinicians worldwide and is now accepted as a common global language for health terms.

Patients and healthcare professionals benefit from improved health records, clinical decisions and analysis, leading to higher quality, consistency and safety in healthcare delivery.

By using numbers to represent medical concepts, SNOMED CT provides a standard by which medical conditions and symptoms can be referred, eliminating the confusion that may result from the use of regional or colloquial terms. The numerical reference system also facilitates the exchange of clinical information among disparate health care providers and electronic medical records (EMR) systems.

Websites:

https://www.snomed.org/

https://www.snomed.org/snomed-ct

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Validation of FHIR resource with custom schema and custom code system extension

I am new to the FHIR world and I am trying to solve healthcare problems in my local region. In my use case, I have following two requirements For Resource I have to use most of the resources as it is from FHIR R4. ex - Encounter,…
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SHACL SPARQLTarget not validating the SPARQL query output nodes

I have a NodeShape with a sh:SPARQLTarget . I tried to run the Target SPARQL query in an ontology editor and it delivered results, but when I'm executing the same query in my custom target node shape in sh:select, it won't validate the target nodes…
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Is Snomed Integration For AWS Medical Comprehend Actually Working?

According to a recent update, the AWS medical comprehend service should now be returning snomed categories along with other medical terms. I am running this in a Python 3.9 Lambda: import json def lambda_handler(event, context): clinical_note =…
Frank O'Connor
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How to create a subgraph from a complex OWL graph which includes owl:intersectionOf, owl:equivalentClass, owl:restriction etc. using SPARQL CONSTRUCT

I want to create a subgraph consisting of only "Disorder sub-hierarchy" of SNOMED. I am trying to create this subgraph from the complete SNOMED-OWL graph using a SPARQL CONSTRUCT query. However the property consisting of owl:equivalentCLass/…
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what is the missing for PYM["SNOMEDCT_US"] python

I am building code using owlread the code has to go throw the text and converts the medical finding to SNOMED ct import nltk import pandas as pd import numpy as np from nltk.stem import PorterStemmer from nltk.corpus import stopwords from…
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How does SNOMED CT define SNOMED_CID?

Each of the concepts in SNOMED CT has the conceptId (SNOMED_CID). Could you please let me know how SNOMED CT defines the SNOMED_CID. Is there any numbering scheme that SNOMED CT follows? SNOMED terms are also available in UMLS. What numbering scheme…
Beautiful Mind
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Does SNOMED provide upgrade maps for code that have become inactive?

It seems that the SNOMED codeset is rapidly evolving. New codes are being added, old codes are being deactivated. Do the releases provide upgrade maps from old code to new codes? (In particular, I'm interested in the UK extension).
user48956
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"patient recommended to drink water" - how to encode in SNOMED/FHIR

How would the procedure: "patient recommended to drink more water" be encoded as a SNOMED expression (or a FHIR procedure?) Are there public guidelines for encoding records? SNOMED's docs seem to be a little sparse on examples.
user48956
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openEHR, Snomed and Measurement units

I'm new to openEHR and snomed. I'm wanting to store information pack definition for a tobacco summary. How do I go about storing the measurement units (grams, oz, number of cigarettes)? Is there a reference list of these in either of the…
user3603308
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Unable to compile setup file of PyMedTermino-0.3.3

I am trying to compile setup.py file of PyMedTermino-0.3.3. Getting an this message error:package directory '.\utils' does not exist after typing python destination_folder\setup.py build getting this output any suggestion will be helpful.
Koushik Deb
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GraphDB: Importing SnoMed CT to GraphDB

I would like to load SNoMed CT data onto GraphDB. Can anyone guide to import the data to GraphDB? I have installed GraphDB workbench so far.
John D
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IEEE code database

As SNOMED and LOINC, I read that there is another universal standard for identifying medical terms called IEEE (whose database would also include fitness/diet/environmental data which I would particularly need for the project I am working on). My…
KeykoYume
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MYSQL code to create transitive closure table fails

I am using the current SNOMED data and examples and I want to create a transitive closure table, but something in my mysql5.6 default server settings are failing. For those who do not know, SNOMED is a medical database. There are 2.1M relationships…
pgee70
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Normalize using SNOMED-CT

I wanted to understand the puropse of using SNOMED-CT for normalization of clinical terms. Let's say I have a criteria/statement like Gender is Male My question is if SNOMED-CT is used for normalizing both Gender and Male OR just one of them…
copenndthagen
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Running multiple subqueries

I am pulling one code (ICD9) which is in table AbsDrgDiagnosis.Diagnosis. I need to pull another code (SNOMED_CT) which is in another table DMisNomenclatureMapCodes.CodeID when DMisNomenclatureMapCodes.CodeSetID = 'SNOMED_CT' Then only way to link…
Rich
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