Stack Overflow
Stack Overflow

Questions tagged [r-environment]

57 questions
1
vote
1 answer

Inside an R function, how do I access the calling environment?

foo <- function() { # how to know what environment_of_caller is } caller <- function() { # environment_of_caller foo() } A function that I'm writing needs to the know the environment of its caller. Can that be done without passing the…
Bear Bile Farming is Torture
  • 4,317
  • 4
  • 27
  • 61
1
vote
0 answers

Detect methods in other environments in R -- for testing in testthat

Is it possible to allow "UseMethod" to see class functions defined in other environments? See the below code for an example. I would like the h.logical to be detected too such that h(TRUE) would return "logical". h <- function(x) { …
Mark
  • 173
  • 4
1
vote
2 answers

Why are objects masked after running library(renv) in R?

I'm following this steps, like in this workflow here: renv::init() working as usual and installing new packages renv::snapshot() The problem I'm facing is while running library(renv), many functions are been masked, like load, so I have to re-mask…
lo labs
  • 89
  • 13
1
vote
1 answer

How load a dynamic data frame in Global R environment?

I am working in the development of an app for decision trees using shiny, and java script. I have a structure of a dynamic tree, where the user can create new branchess and nodes and when the user finishes the construction of his tree, he can press…
coding
  • 917
  • 2
  • 12
  • 25
1
vote
2 answers

Change default directory opened by RStudio when I "File/Open Project..."

When I click on "File/Open Project..." RStudio opens my home directory at "~", but I would like to open the directory at "~/Documents/coding/" where I store all my Rprojects. How can I change the default directory that RStudio opens when it opens…
Joe
  • 3,217
  • 3
  • 21
  • 37
1
vote
1 answer

What is the best way to create the user library directory set in .Renviron?

I'm trying to find the best way to setup R for my team. Because our institution has the user home directory on a network share, the R user library is defaulted to this network share. After some research, I found that setting R_LIBS_USER in the…
Jelger van Zaane
  • 69
  • 13
1
vote
1 answer

Reading data into R

I am trying to read data from the msigdb database into my R environment, but I am having trouble reading it into the format that I would like. Right now when I read the data in it is read as the type "integer", I want it read in as the type…
Rohan Singhal
  • 33
  • 3
1
vote
1 answer

How to check if an environment is a package namespace

I am looking for a way to detect if an environment is a package namespace. Desired behavior: is.namespace(environment(data.frame)) ## [1] TRUE is.namespace(environment(ggplot2::ggplot)) ## [1] TRUE is.namespace(globalenv()) ## [1]…
landau
  • 5,636
  • 1
  • 22
  • 50
1
vote
1 answer

Define environment only accessible from a given function

I have the following function designed to print a progress bar outside of loops, it works well but creates an environment object in the global environment. I'm not so comfortable with environments but I think I could set up this environment to be…
moodymudskipper
  • 46,417
  • 11
  • 121
  • 167
0
votes
0 answers

Using GAMLSS predictions within a wrapper function

I'm trying to write functions that wrap basic gamlss modeling (because I'm preparing a higher-level, application-specific package). But I've run into issues wrapping predict. The example from the predict.gamlss documentation works…
Krisrs1128
  • 311
  • 4
  • 8
0
votes
1 answer

Using base load in an active renvironment

I am working on an R markdown notebook in an active renv in my R project directory. Before I had activated the environment, I could use the load function from base R without a problem. But since activating the environment, I get errors when I use…
dapple-putt-poultry
  • 103
  • 6
0
votes
0 answers

MICE package in R 10x slower with new R

I recently updated my R (from 4.0 to 4.2) and now mice() runs much slower on the same data. Has this happened to anyone else ? Maybe my .Renviron got reset and something like the R_MAX_VSIZE needs to change ? It doesn't seem to help mice(). Thank…
Shira
  • 119
  • 5
0
votes
1 answer

RShiny adding a module within a loop, based on user input

I want to make an RShiny app where the user can select a folder, and then add a navbarMenu containing as many tabPanels as there are files in the selected folder. The tabPanels are made with a module. Here is an app with a button that adds just one…
Quillox
  • 11
  • 2
0
votes
1 answer

I can't install the sf package when I use the renv package in a project

I started a new project in Rstudio and selected the option to use renv. The first thing I did was type the command install.packages('sf') and R returned the message below. How to proceed? > install.packages('sf') Error: package 'sf' is not…
Igor
  • 145
  • 8
0
votes
1 answer

inheritance in rlang's env_get doesn't seem to see bindings in the grandparent environment

In the following example, I try to get an element from a grandparent environment using env_get. The first bit works as expected. library(rlang) e1 <- env(a = 'a') # works as expected f <- function() { env_get( env = caller_env(), nm =…
crf
  • 1,810
  • 3
  • 15
  • 23
1 2
3
4