Questions tagged [imputation]

Missing data imputation is the process of replacing missing data with substituted, 'best guess', values. Because missing data can create problems for analyzing data and can lead to missing-data bias, imputation is seen as a way to avoid the problems associated with listwise deletion (ignoring all observations with any missing values).

Missing data imputation is the process of replacing missing data with substituted, 'best guess', values. Because missing data can create problems for analyzing data and can lead to missing-data bias, imputation is seen as a way to avoid the problems associated with listwise deletion (ignoring all observations with any missing values). Multiple methods for imputation exist, including: imputing missing values with a single value, such as the mean or median or some specific value based on domain-expertise; distance based heuristics such as kNN; stochastic averaging via multiple imputation; and model-based methods including Expectation Maximization (EM).

Suggested tag synonym: "missing-data"

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Multidimensional PyMC3 Observations

My model has a LogNormal RV, C, of shape (W,D). Each row in W and each column in D has a parameter that is being fit. I have tried to specify my observations as a (W,D) matrix, however, that is leading to a theano compile error raise…
Zachary Luety
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how to fill missing values in a vector with the mean of value before and after the missing one

Currently I am trying to impute values in a vector in R. The conditions of the imputation are. Find all NA values Then check if they have an existing value before and after them Also check if the value which follows the NA is larger than the…
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Pandas Replace NaN values based on random sample of values conditional on another column

Say I have a dataframe like so: import pandas as pd import numpy as np np.random.seed(0) df = {} df['x'] = np.concatenate([np.random.uniform(0, 5, 4), np.random.uniform(5, 10, 4)]) df['y'] = np.concatenate([[0] * 4, [1] * 4]) df =…
Julian Drago
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Pandas - Interpolating/imputing missing values within groups of multiple time series

I'm working with a dataset which has monthly information about several users. And each user has a different time range. There is also missing data for each user. What I would like to do is fill in the missing data for each user based on the time…
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How to impute only one or some columns with mice R

I am experimenting with the mice package in R and am curious about how i can leave columns out of the imputation. If i want to run a mean imputation on just one column, the mice.impute.mean(y, ry, x = NULL, ...) function seems to be what I would…
MadMan
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variable fillna() in each column

For starters, here is some artificial data fitting my problem: df = pd.DataFrame(np.random.randint(0, 100, size=(vsize, 10)), columns = ["col_{}".format(x) for x in range(10)], index = range(0, vsize * 3, 3)) df_2 =…
Greem666
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Inserting missing rows with imputed values in Python

Problem How can you insert rows for missing YEARS, with imputed annual SALES. Progress The following code computes the sales differences. However, it is for one year, using the explicit iloc pointer technique. import pandas as pd data = {"YEAR":…
MinneapolisCoder9
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how to replace NaN value in python

I have a list of NaN values in my dataframe and I want to replace NaN values with an empty string. What I've tried so far, which isn't working: df_conbid_N_1 = pd.read_csv("test-2019.csv",dtype=str, sep=';',…
user6223604
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How to do multiple imputation on Julia?

I've found the package Impute.jl but it's only able to use these simple methods: drop: remove missing. locf: last observation carried forward nocb: next observation carried backward interp: linear interpolation of values in vector fill: replace…
skan
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Simple way to do a weighted hot deck imputation in Stata?

I'd like to do a simple weighted hot deck imputation in Stata. In SAS the equivalent command would be the following (and note that this is a newer SAS feature, beginning with SAS/STAT 14.1 in 2015 or so): proc surveyimpute…
JohnE
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Why is XGBRegressor prediction warning of feature mismatch?

I want to use XGBRegressor to predict some data. So I load the training data and the test data. iowa_file_path = '../input/train.csv' test_data_path = '../input/test.csv' data = pd.read_csv(iowa_file_path) test_data =…
rcs
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Pandas DataFrames column not being identified as numeric

I was working with a Pandas dataframe, using the UCI repository credit screening file at http://archive.ics.uci.edu/ml/machine-learning-databases/credit-screening/crx.data The data contains some missing values and I want to perform a different…
dr_otter
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multinominal regression with imputed data

I need to impute missing data and then coduct multinomial regression with the generated datasets. I have tried using mice for the imputing and then multinom function from nnet for the multnomial regression. But this gives me unreadable output. …
Branners
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Time series Imputation based on ID

I am working on a time series data. The dataset is: datALL <- read.table(header=TRUE, text=" ID Year Align A01 2017 329 A01 2016 NA A01 2015 NA …
S Das
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Marginal effects with survey weights and multiple imputations

I am working with survey data that use probability weights and multiple imputations. I would like to get marginal effects after estimating a logit model using the imputed data sets and the survey weights. I cannot figure out how to do this in R.…
scottsmith
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