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Questions tagged [hidden-markov-models]

Hidden Markov Models are a model for understanding and predicting sequential data in statistics and machine learning, commonly used in natural language processing and bioinformatics.

Hidden Markov Models (HMM) are a model for understanding and predicting sequential data in statistics and machine learning, commonly used in natural language processing and bioinformatics. In HMM, the hidden state variable cannot be observed, but usually some output variable that dependent on the hidden state is visible.

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Difference between GMM and HMM

From what I understand: GMM is a probabilistic model which can model N sub population normally distributed. Each component in GMM is a Gaussian distribution. HMM is a statistical Markov model with hidden states. When the data is continuous, each…
lmelaam
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Input Output Hidden Markov Model Implementation in Python

I am trying to implement Hidden Markov Models with Input Output Architecture but I could not find any good python implementation for the same. Can anybody share the Python package the would consider the following implementation for HMM. Allow…
Rajat
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Baum-Welch algorithm for pos tagger

everyone. I'm using the Baum-Welch algorithm to train a pos tagger,it is totally in the unsupervised way. Here comes the problem: When i get the label result, I only get a sequence of numbers. I can't figure out which label stands for VV,NN,DT. How…
David
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Bad quality of Viterbi Algorithm (HMM)

I've been trying to get into hidden Markov models and the Viterbi algorithm recently. I found a library called hmmlearn (http://hmmlearn.readthedocs.io/en/latest/tutorial.html) to help me generate a state sequence for two states (with Gaussian…
Billy
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Obtaining the observations within each cluster for Mixture of Hidden Markov Model (MHMM) in R (Package seqHMM)

I am using Mixture of Hidden Markov Model (MHMM) to cluster my data. To do so, I used Package "seqHMM" in R. My question is whether it is possible to obtain the actual observations within each cluster. Like for example, after my analysis, I have 3…
Nazanin E
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r msm BLAS/LAPACK routine 'DGEBAL' gave error code -3

I'm trying to make a basic markov model using the package msm and things were working fine until I've suddenly started receiving the following error code. I don't know why it's suddenly started throwing this as it was working fine earlier, and I…
ajuey
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Markov Chain with banking data

Trying to create a hidden markov model to find recurring payments in this transactions json: https://pastebin.com/tzRaqMxk I created a similarity score, to estimate the likely hood of a transaction date, amount, and name being a recurring…
user1093111
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How do i extract the posterior probability of the hmm?

I just extracted a alignment from my model at a frame level. fash-b-an251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134 134 134 134 134 134 134 134 134 44 44 44 44 44 44 44 44 44 111 111 111 111 111 111 111 111 111 111 1 1 1…
I am not Fat
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Classify stream of data using hidden markov models

Problem In an on-line process consisting of different steps I have data of people that complete the process and the people that drop out. The each user, the data consists of a sequence of process steps per time interval, let's say a second. An…
Marcel
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Top k-best paths in HMM with k > number of hidden states

I have implemented a k-best Viterbi algorithm in order to extract k-best paths through an HMM as described here. However, I get an error in case k is greater than the number of hidden states. Consider the following: At the first observation at time…
David Ba
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How to use machine learning to calculate a graph of states from a sequence of data?

Generic formulation I have a dataset consisting of a sequence of points with 12 features each. I am interested in detecting an event in this data. In the training data I know the moments the event occurred. When the event occurs I can see an…
Stefan Alexandru
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Error in Saving NLTK HMM

I was trying to save HMM Tagger of NLTK as follows, with Pickle. But it is giving me error as follows, Please suggest me a solution. >>> import nltk >>> import pickle >>> brown_a = nltk.corpus.brown.tagged_sents()[:300] >>>…
Coeus2016
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Formatting data for hmmlearn

I'm trying to fit a hidden Markov model using hmmlearn in python. I assume that my data is not formatted correctly, however the documentation is light for hmmlearn. Intuitively I would format the data as a 3 dimensional array of n_observations x…
piman314
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Is Word2Vec and Glove vectors are suited for Entity Recognition?

I am working on Named Entity Recognition. I evaluated libraries, such as MITIE, Stanford NER , NLTK NER etc., which are built upon conventional nlp techniques. I also looked at deep learning models such as word2vec and Glove vectors for representing…
rusty
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Evaluating sequence with a fitted model using depmixS4 in R

If I have fit a model mf with depmix() and fit() using depmixS4 package, and I want to know the log-likelihood of generating a given sequence s, how should I do? I know in the HiddenMarkov package I can use forwardback(s, mf$Pi, mf$...)$LL to get…
Lytze
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