DRMAA or Distributed Resource Management Application API is a high-level Open Grid Forum API specification for the submission and control of jobs to a Distributed Resource Management (DRM) system, such as a Cluster or Grid computing infrastructure. The scope of the API covers all the high level functionality required for applications to submit, control, and monitor jobs on execution resources in the DRM system. (From Wikipedia)
Questions tagged [drmaa]
27 questions
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D R M based computing in Blender
Can 2.79 blender or 2.80 blender (Linux Versions) take advantabe of multiple GPU cards? If so, how many in same motherboard.
I have hundreds of GPU cards and motherboards available. Looking for correct drivers for RX 580 series RADION GPUs for…
Mike Trest
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1 answer
Setting the SGE cluster job name with Snakemake while using DRMAA?
Problem
I'm not sure if the -N argument is being saved. SGE Cluster. Everything works except for the -N argument.
Snakemake requires a valid -N call
It doesn't set the job name properly.
It always reverts to the default name. This is my call,…
TBoyarski
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Snakemake cluster config in combination with DRMMA
I have a question related to drmma and the cluster config file in snakemake.
Currently i have a pipeline and I submit jobs to the cluster using drmma with the following command:
snakemake --drmaa " -q short.q -pe smp 8 -l membycore=4G" --jobs 100 -p…
fgypas
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Get host of running job with DRMAA interface
Using the DRMAA interface to Son of Grid Engine I would like to get the name of a host running a particular job. I would like something like the following (using the drmaa-python interface)
>>> import drmaa
>>> s = drmaa.Session()
>>>…
MRocklin
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2 answers
Changing priority of job in SGE using python drmaa wrapper
When I try to submit a job using the python drmaa wrapper, I get a DeniedByDrmException: code 17: job rejected: positive submission priority requires operator privileges.
How do I change the priority of jobs that I submit using the Python DRMAA…
Sandman
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no Drmaa JNI in java.library.path error
Hi I am new to Drmaa and trying to work on it for a project .
I have installed drmaa.jar from this location http://www.java2s.com/Code/Jar/d/Downloaddrmaajar.htm in my eclipse and tried a simple project :
Try.java :
import org.ggf.drmaa.*;
…
Newbie
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drmaa error with sun grid engine - No active session
Hi I've installed gridengine on a 4-node cluster using the following command:
sudo apt-get install gridengine-client gridengine-qmon gridengine-exec gridengine-master
sudo apt-get install gridengine-exec gridengine-client
And it returned:
SGE_ROOT:…
desmo
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Can a local Java program start jobs remotely via SSH using DRMAA?
How does DRMAA work? Can a local Java program using DRMAA start jobs on a remote cluster over SSH (so that nothing will need to be installed on the server-side)?
Background:
I'm developing a general (or as general as possible) HPC client in…
Samuel Lampa
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DRMAA and the shared.library.path
I try to use the sun grid engine with the DRMAA api by following the tutorial found at: http://gridscheduler.sourceforge.net/howto/drmaa_java.html. For this I need to load the c library located in /srv/sge/lib/lx24-amd64/drmaa.so. Now I execute my…
Jetse
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1 answer
Turn DEBUG messages off in drmaa-python
I am using DRMAA python bindings (see here http://code.google.com/p/drmaa-python/) to manage distributed jobs via Condor on a cluster.
I cannot find a way to turn off the DEBUG messages that the code prints to the terminal.
For example:
DEBUG: Now…
user2054752
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1 answer
efficient way to wait for job completion : python and drmaa
I wanted to ask about "wait" feature in drmaa API I am using through Python. Does it do constant qstat's ( if we are running it on SGE) to check whether a program has finished execution.
Our admin want us to avoid any constant qstat's as it slows…
Abhi
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3 answers
Problem in using C dynamic loading routines
I have an application consisting of different modules written in C++.
One of the modules is meant for handling distributed tasks on SunGrid Engine. It uses the DRMAA API for
submitting and monitoring grid jobs.If the client doesn't supports grid,…
sud03r
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