bookdown is an R package for authors to write books and long-form articles using R Markdown
The bookdown package is an R package for authors to write books and long-form articles using R Markdown. For more information, see https://bookdown.org.
Questions tagged [bookdown]
1019 questions
6
votes
0 answers
floating TOC in tufte book
I am trying to do something simple: render the tufte options for a book using the basic bookdown example package. I can make the tufte style book fine, but I want it to have the floating TOC and not the TOC at the top
Following the Definitive Guide…
Chip Brock
- 81
- 2
6
votes
1 answer
Bookdown not building - replacement length zero
I'm getting the following error when trying to build this gitbook on my local machine (was trying to use it as a template for creating my own work):
https://github.com/lgatto/IntroMachineLearningWithR
Error:
Error in x[i] <- sprintf("
dvanic
- 545
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6
votes
1 answer
Can't use PLOS rticles template with bookdown
Following this post, I'm trying to put @YihuiXie 's answer in practice with the PLOS template of rticles but it doesn't work. Any help would be very appreciated!
Below in a minimal example:
---
title: Title of submission to PLOS journal
author:
-…
julou
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6
votes
1 answer
set width of embedded url
In R, the function include_url() from the knitr package allows to set the height, but not the width of an embedded iframe.
knitr::include_url("https://www.youtube.com/embed/9bZkp7q19f0", height="315")
The above will embedd the youtube with height…
Paulo
- 397
- 2
- 11
6
votes
1 answer
Auto-Numbering of Figure and Table Captions for HTML Output in R Markdown
Is there a way to automatically number the figures in captions when I knit R Markdown document into an HTML format?
What I would like is for my output to be the following:
Figure 1: Here is my caption for this amazing graph.
However, I am…
DuckDuckGoose
- 63
- 1
- 4
6
votes
1 answer
Properly indent paragraphs within list items when using bookdown
How do I properly indent paragraphs within lists in bookdown? I would like to start a new paragraph after a blank line as show in the example below. This example works for RMarkdown when used outside of bookdown but breaks down when used with the…
user2633313
- 119
- 8
6
votes
2 answers
How to change to another bibliography style in Bookdown
I want to another bibliography style instead of apalike in Bookdown, and when I changed to nature which is number style, and built the book, it prompted me,
����: Failed to build the bibliography via bibtex
Please delete bookdown.Rmd after you…
Minyi Han
- 807
- 1
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6
votes
2 answers
Manual numbering in bookdown
Is it possible to control chapter/section numbering in bookdown?
e.g.
# Introduction {1}
# Theory {14}
# Methods {3}
would give the following in the output...
1. Introduction
14. Theory
3. Methods
Paul
- 328
- 2
- 11
6
votes
2 answers
Cross-referencing DT::datatable in bookdown
I am trying to create a reference to DT::datatable in a bookdown project.
The bookdown manual states that (\#tab:label) should be placed at the beginning of the table caption. For testing, I created a new bookdown project in R-studio but replaced…
rbrisk
- 306
- 1
- 7
6
votes
1 answer
R: Removing the "Chapter" part from the title in bookdown::pdf_book with documentclass: report
consider my header and first section
---
title: "asdf"
author: "asdf"
date: "13 Januar 2018"
documentclass: report
output:
bookdown::pdf_book:
citation_package: biblatex
latex_engine: pdflatex
number_sections: yes
fig_caption:…
Gregor
- 160
- 1
- 6
6
votes
1 answer
RMarkdown: bookdown with plotly
I'm using the bookdown package with RMarkdown to generate web-based book similar to this, likewise with the option to download a pdf-version of the book.
I've included plotly graphs in my "book" which work nicely in the html-version of the book.…
Ratnanil
- 1,641
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6
votes
1 answer
How do I put Bookdown chapters in a subdirectory?
I can't figure put how to make a book with Rmd files in a subdirectory.
Here's my current directory structure:
myProject.Rproj
index.RMD
_bookdown.yml
chapters/
chapt1.RMD
chapt2.RMD
extraThatShouldNotBeIncluded.RMD
What should go in…
sharoz
- 6,157
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6
votes
1 answer
More flexible citation formats
I love to use citations in my r bookdown projects.
The format is not very flexible, I can use @citeID to get "Author(Year)" or [@citeID] to get "(Author Year)".
Sometimes I only need "(Year)" or "Year" or I may only need "Author Year" with no…
kadewe
- 61
- 2
6
votes
1 answer
print the data.table package's .onAttach messages with knitr
I have a bookdown rmd looking like...
Further introductory materials are offered when the package is loaded:
```{r dt-startup, echo=-1, message=TRUE, verbose=TRUE, hide=FALSE}
if ("data.table" %in% .packages())…
Frank
- 66,179
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- 180
6
votes
3 answers
Cross-referencing in rticles
The bookdown offers great cross-referencing options for equations, figures, tables and sections:
https://bookdown.org/yihui/bookdown/cross-references.html
However, they seems to not work when I set as an output 'rticles::elsevier_article'.
What are…
matandked
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