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I'm trying to visualize droplet simulation.

I deleted water molecules that is far from the system of interest during the simulation.

Therefore, the number of atoms decreases as model proceeds.

However, VMD could not recognize such pdb file, because of the way it working.

I found a way to use multimolanim plugin with separated files, but I have more than 1000 frames...

Is there an other way to visualize such PDB file??

Kim
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